PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN20938.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 293aa    MW: 32482.2 Da    PI: 6.2547
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN20938.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.18.4e-10215256955
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  ++RR+ri +++  L+el+P+       K++ +++LekA+ Y+k Lq
  KHN20938.1 215 AKNRRERISERLKILQELVPNG-----SKVDLVTMLEKAISYVKFLQ 256
                 69*******************5.....5******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.951206255IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.7E-12207264IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.61E-11208260No hitNo description
SuperFamilySSF474591.83E-13208265IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-11212261IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.7E-7216256IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0016787Molecular Functionhydrolase activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MALSLTSNGV NEYQKCVVEE EDGSQSTNGL SNDSASAITN SPPLCGNEYV HKSTHYQLEE  60
AESLINFKAN DQYNNLMQGS ESFLSFQQSW MFSKESNLHE GYNQWNHVIS PKSPTDMRLV  120
QNFSCFETAT GYSSIFNGAK DKQHGESSSS GWLYSEPNVP SDSLHESAAQ ELVLKKRSFM  180
GENMQVTNAK KPCTSASKAA KPKSNPSQDP QSVAAKNRRE RISERLKILQ ELVPNGSKVD  240
LVTMLEKAIS YVKFLQLQVK VLAADEFWPV QGGKAPDISQ VRQAIDAILS SQR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311230.0KT031123.1 Glycine max clone HN_CCL_81 bHLH transcription factor (Glyma14g07590.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014622378.10.0PREDICTED: putative transcription factor bHLH086
SwissprotQ9FJ009e-63BH086_ARATH; Putative transcription factor bHLH086
TrEMBLA0A0B2QM310.0A0A0B2QM31_GLYSO; Putative transcription factor bHLH086-like protein
TrEMBLI1M8670.0I1M867_SOYBN; BHLH transcription factor
STRINGGLYMA14G07590.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49373253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37800.15e-64RHD SIX-LIKE 1
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]